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1

A simplified AFLP method for fingerprinting of common wheat (Triticum aestivum L.) cultivars

100%
Tyrka M.
Journal of Applied Genetics
|
2002
|
vol. 43
|
issue 2
131-143
EN
The simplified AFLP method was developed and evaluated for identification and genetic diversity studies of wheat cultivars. Selective primers exploited in AFLP assay based on a single cutting enzyme PstI (PstIAFLP) generated total of 111 robust fragments, including 67 (60%) monomorphic and 12 (11%) cultivar-specific markers. Average similarity between 15 cultivars was 0.650, and varied from 0.293 (?Hope? vs. ?Aurora?) to 0.865 (?Norman? vs. ?Hornet?). Mean similarities within groups of winter wheat cultivars with and without 1BL/1RS chromosome were 0.713 and 0.685, respectively. A higher variation was found in the group of spring wheats: 0.677. The obtained results confirm the usefulness of the proposed modification of the AFLP technique for diversity studies and identification of common wheat cultivars.
2

Fingerprinting of common wheat cultivars with an Alw44I-based AFLP method

100%
Tyrka M.
Journal of Applied Genetics
|
2004
|
vol. 45
|
issue 4
405-410
EN
A simplified AFLP method, based on methylation-sensitive Alw44I restriction endonuclease, has been developed and evaluated for fingerprinting 15 wheat cultivars. The selected germplasms represented groups of spring and winter wheats with and without the 1BL.1RS translocation. Ten selective primers yielded 57 markers, including 19 polymorphic bands. Three markers (15.8%) were specific to wheat carrying the 1BL.1RS translocation, thus conflicting with the frequency expected by random marker distribution (2.4%), and suggesting qualitative differences in DNA methylation among winter wheat cultivars with the 1BL.1RS translocation. Mean Dice's similarities ranged from 0.85 to 0.99, thus all cultivars could be identified by the banding profile. Winter wheat cultivars, with and without the 1BL.1RS chromosome, were slightly more similar to one another (0.959) than spring wheat cultivars (0.952). Five (9%) specific markers were obtained from cultivars Sicco, Cheyenne, Fenman, Disponent and Chinese Spring.
3

Enhancing the resistance of triticale by using genes from wheat and rye

64%
Tyrka M., Chelkowski J.
Journal of Applied Genetics
|
2004
|
vol. 45
|
issue 3
283-295
EN
At present two separate nomenclature systems exist for wheat and rye. This paper provides a proposed common catalogue of wheat, rye and triticale resistance gene symbols. More than 130 postulated wheat resistance genes are listed. Over 39 rye and 6 triticale resistance (R) genes have been identified and named. Genes responsible for reaction to powdery mildew and to leaf, stem and yellow rusts are the best-represented group of resistance genes. From the common catalogue it can be concluded that there exists a potential for further transfer of rye resistance genes to wheat and triticale. Many molecular markers can be applied for marker-assisted gene transfer, but the expression of the R genes in the new genetic background of triticale remains to be investigated.
4

Gene transfer from Aegilops ventricosa to Triticum aestivum

51%
Tyrka M., Stefanowska G., Brzezinski W.
Biotechnologia
|
2001
|
issue 2
57-62
EN
RAPD (Randomly Amplified Polymorphic DNA) and glutenin SDS-PAGE analyses were performed on wheat hybrid strains derived from multiple crosses of hybrids between Ae. ventricosa and T. durum with hexaploid wheat. We found Aegilops specific bands (G03580 and T02990) in two hybrid strains (VGPB and VGPAA) using RAPD method. The presence of Ae. ventricosa specific fraction of glutenin was shown in one wheat hybrid strain (VGPP).
5

Assessing genetic variation to predict the breeding value of winter triticale cultivars and lines

51%
Goral H., Tyrka M., Spiss L.
Journal of Applied Genetics
|
2005
|
vol. 46
|
issue 2
125-131
EN
The objective of this study was to evaluate the usefulness of amplified fragment length polymorphism (AFLP) analyses for selection of the best parents for breeding of hybrid winter triticale. Phenotypic diversity was measured for 8 agronomic traits in 10 parents and 27 F1 hybrids. Genotypic diversity was measured by 91 AFLP markers. Coefficients of correlation of genetic similarity (AFLP-GS) with both Euclidean distances and mean values of the traits were generally not significant. A correction of the preliminary binary matrix into trait-specific derived matrices increased the values of 5 correlation coefficients to a significant level. The correlation of AFLP-GS with mid-parent heterosis of grain weight per plant was low but significant (r = ?0.452). Our study confirms the effectiveness of marker preselection for obtaining AFLP-GS better correlated with heterosis. The use of derived matrices is promising for reducing the number of cross combinations tested for specific combining ability.
6

PstIAFLP based markers for leaf rust resistance genes in common wheat

51%
Blaszczyk L., Tyrka M., Chelkowski J.
Journal of Applied Genetics
|
2005
|
vol. 46
|
issue 4
357-364
EN
The aim of the present study was to detect candidate DNA markers for selected leaf rust resistance genes. A total number of 286 loci in the ?Thatcher' near-isogenic lines carrying resistance gene Lr1, Lr9, Lr10, Lr13, Lr19, Lr21, Lr24, Lr26, Lr28, Lr35, and Lr37 were screened for DNA polymorphism by the PstIAFLP method. A survey with 33 selective primers yielded 16 candidate markers. Further validation studies on cultivars characterized for the presence and absence of selected resistance genes confirmed specificity of markers for Lr24, Lr26 and Lr37. The AFLP-based marker P42-530 was successfully converted into an STS marker. The new marker was linked with the Lr37-specific marker (CslVrga13) at the distance of 1.7 cM. The PstIAFLP method was found to be effective in the identification of DNA changes induced in hexaploid wheat by translocations from Agropyron elongatum, Secale cereale and Aegilops ventricosa.
7

A new diagnostic SSR marker for selection of the Rym4/Rym5 locus in barley breeding

51%
Tyrka M., Perovic D., Wardynska A., Ordon F.
Journal of Applied Genetics
|
2008
|
vol. 49
|
issue 2
127-134
EN
Genomic sequence AY661558, representing a part of the BAC contig of the Rym4/Rym5 locus conferring resistance to the barley yellow mosaic virus complex (BaMMV/BaYMV), was exploited in order to develop SSR markers for practical barley breeding. Out of 57 SSR motifs found within this sequence, primers were designed and tested for the 5 SSRs with the highest repeat length. The polymorphic SSR marker QLB1 co-segregated with rym4 and rym5 phenotypes in respective high-resolution mapping populations developed for the construction of the original BAC contig. The primers targeted 2 sites located 756 bp and 5173 bp downstream of the translation initiation factor 4E (Hv-eIF4E). Physical linkage of the QLB1 marker to the Rym4/Rym5 locus was confirmed experimentally on Morex BAC 519J14, a seed BAC of Hv-eIF4E, and BAC 801A11, which is located proximally to Hv-eIF4E. QLB1 revealed 7 alleles in a set of 100 winter barley lines and cultivars. Five alleles were found within 673 advanced breeding lines derived from applied Polish winter barley breeding programmes, which corresponds to a PIC value of 0.684. No recombinants between Rym4/5 and QLB1 were detected, suggesting that QLB1 can be used efficiently in marker-assisted selection of the Hv-eIF4E-mediated bymovirus resistance.
8

Resistance genes in barley (Hordeum vulgare L.) and their identification with molecular markers

51%
Chelkowski J., Tyrka M., Sobkiewicz A.
Journal of Applied Genetics
|
2003
|
vol. 44
|
issue 3
291-309
EN
Current information on barley resistance genes available from scientific papers and on-line databases is summarised. The recent literature contains information on 107 major resistance genes (R genes) against fungal pathogens (excluding powdery mildew), pathogenic viruses and aphids identified in Hordeum vulgare accessions. The highest number of resistance genes was identified against Puccinia hordei, Rhynchosporium secalis, and the viruses BaYMV and BaMMV, with 17, 14 and 13 genes respectively. There is still a lot of confusion regarding symbols for R genes against powdery mildew. Among the 23 loci described to date, two regions Mla and Mlo comprise approximately 31 and 25 alleles. Over 50 R genes have already been localised and over 30 mapped on 7 barley chromosomes. Four barley R genes have been cloned recently: Mlo, Rpg1, Mla1 and Mla6, and their structures (sequences) are available. The paper presents a catalogue of barley resistance gene symbols, their chromosomal location and the list of available DNA markers useful in characterising cultivars and breeding accessions.
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