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2005 | 52 | 1 | 139-147

Article title

Effect of SOS-induced Pol II, Pol IV, and Pol V DNA polymerases on UV-induced mutagenesis and MFD repair in Escherichia coli cells.

Content

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EN

Abstracts

EN
Irradiation of organisms with UV light produces genotoxic and mutagenic lesions in DNA. Replication through these lesions (translesion DNA synthesis, TSL) in Escherichia coli requires polymerase V (Pol V) and polymerase III (Pol III) holoenzyme. However, some evidence indicates that in the absence of Pol V, and with Pol III inactivated in its proofreading activity by the mutD5 mutation, efficient TSL takes place. The aim of this work was to estimate the involvement of SOS-inducible DNA polymerases, Pol II, Pol IV and Pol V, in UV mutagenesis and in mutation frequency decline (MFD), a mechanism of repair of UV-induced damage to DNA under conditions of arrested protein synthesis. Using the argE3→Arg+ reversion to prototrophy system in E. coli AB1157, we found that the umuDC-encoded Pol V is the only SOS-inducible polymerase required for UV mutagenesis, since in its absence the level of Arg+ revertants is extremely low and independent of Pol II and/or Pol IV. The low level of UV-induced Arg+ revertants observed in the AB1157mutD5ΔumuDC strain indicates that under conditions of disturbed proofreading activity of Pol III and lack of Pol V, UV-induced lesions are bypassed without inducing mutations. The presented results also indicate that Pol V may provide substrates for MFD repair; moreover, we suggest that only those DNA lesions which result from umuDC-directed UV mutagenesis are subject to MFD repair.

Keywords

Year

Volume

52

Issue

1

Pages

139-147

Physical description

Dates

published
2005
received
2004-12-29
accepted
2005-03-12

Contributors

  • Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland
  • Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland
  • Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland
  • Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Warszawa, Poland

References

  • Bachmann BJ. (1987) Derivations and genotypes of some mutant derivatives of Escherichia coli K-12, In Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology. Neidhardt FC, Ingraham J, Low KB, Magasanik B, Schaechler M, Umbarger HE, eds, vol 2, pp 1190-219, AMS Press, Washington D.C.
  • Borden A, O'Grady PI, Vendeviele D, Fernandez de Henestrosa AR, Lawrence CW, Woodgate R. (2002) Escherichia coli DNA polymerase III can replicate efficiently past a T-T cis-syn cyclobutane dimer if DNA polymerase V and the 3' to 5' exonuclease proofreading function encoded by dnaQ are inactivated. J Bacteriol.; 184: 2674-81.
  • Doudney CO, Haas FL. (1958) Modification of ultraviolet induced mutation frequency and survival in bacteria by post-irradiation treatment. Proc Natl Acad Sci USA.; 44: 390-8.
  • Escarceller M, Hicks J, Godmundsson G, Trump G, Touati D, Lovett S, Foster PL, McEntee K, Goodman MF. (1994) Involvement of Escherichia coli DNA polymerase II in response to oxidative damage and adaptive mutation. J Bacteriol.; 176: 6221-18.
  • Fabisiewicz A, Janion C. (1998) DNA mutagenesis and repair in UV-irradiated E. coli K-12 under condition of mutation frequency decline. Mutat Res.; 402: 59-66.
  • Friedberg EC, Walker GC, Siede W. (1995) SOS response and DNA damage tolerance in Procaryotes. In DNA Repair and Mutagenesis. Friedberg EC, Walker GC, Siede W. eds, pp 407-34, ASM Press, Washington, D.C.
  • Gonzalez M, Woodgate R. (2001) The tale of UmuD and its role in SOS mutagenesis. BioEssays.; 24: 141-8.
  • Goodman MF, Woodgate R. (2000) The biochemical basis and in vivo regulation of SOS-induced mutagenesis promoted by Escherichia coli DNA polymerase V (UmuD'2C). Cold Spring Harb Symp. Quant. Biol.; 65: 31-40.
  • Grzesiuk E, Janion C. (1994) The frequency of MMS-induced, umuDC-dependent mutations declines during starvation in Escherichia coli. Mol Gen Genet.; 245: 486-92.
  • Janion C. (2001) Some aspects of the SOS response system - a critical survey. Acta Biochim Polon.; 48: 599-610.
  • Janion C, Sikora A, Nowosielska A, Grzesiuk E. (2002) Induction of the SOS response in starved Escherichia coli. Environ Mol Mutagen.; 40: 129-33.
  • Kim SR, Meanhaut-Michel G, Yamada M, Yamamoto Y, Matsui K, Sofuni T, Nohmi T, Omori H. (1997) Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA. Proc Natl Acad Sci USA.; 94: 13792-7
  • McKenzie GJ, Magner DB, Lee PL, Rosenberg SM. (2003) The dinB operon and spontaneous mutation in Escherichia coli. J Bacteriol.; 185: 3972-7.
  • Miller JH. (1972) Experiments in Molecular Genetics, p 274. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
  • Mitchell DL, Nairn RS. (1989) The biology of the (6-4) photoproducts. Photochem Photobiol.; 49: 805-19.
  • Napolitano R, Janel-Blintz R, Wagner J, Fuchs RPP. (2000) All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis. EMBO J.; 19: 6259-65.
  • Nowosielska A, Janion C, Grzesiuk E. (2004a) Effect of deletion of SOS-induced polymerases, pol II, IV and V, on spontaneous mutagenesis in Escherichia coli mutD5. Environ Mol Mutagen.; 43: 226-34.
  • Nowosielska A, Nieminuszczy J, Grzesiuk E. (2004b) Spontaneous mutagenesis in exponentially growing and stationary-phase, umuDC-proficient and -deficient, Escherichia coli dnaQ49. Acta Biochim Polon.; 51: 683-92.
  • Reuven NB, Arad G, Maor-Shoshani A, Livneh Z. (1999) The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication. J Biol Chem.; 274: 31763-6.
  • Schaaper RM, Cornacchio R. (1992) An Escherichia coli dnaE mutation with suppressor activity toward mutator mutD5. J Bacteriol.; 174: 1974-82.
  • Selby CP, Sancar A. (1991) Gene and strand-specific repair in vitro; partial purification of a transcription-repair coupling factor. Proc Natl Acad Sci USA.; 88: 8232-6.
  • Selby CP, Sancar A. (1994) Mechanism of transcription-repair coupling and mutation frequency decline. Microbiol Rev.; 58: 317-29.
  • Sutton MD, Walker GC. (2001) Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination. Proc Natl Acad Sci USA.; 98: 8342-9.
  • Sutton MD, Smith BT, Godoy VG, Walker GC. (2001) The SOS response: recent insights into umuDC-dependent mutagenesis and DNA damage tolerance. Annu Rev Genet.; 34: 479-97.
  • Szekeres ES, Woodgate R, Lawrence CW. (1996) Substitution of mucAB or rumAB for umuDC alters the relative frequencies of the two classes of mutations induced by a site-specific T-T cyclobutane dimer and the efficiency of translesion DNA synthesis. J Bacteriol.; 178: 2559-63.
  • Śledziewska-Gójska E, Grzesiuk E, Płachta A, Janion C. (1992) Mutagenesis of Escherichia coli.: A method for determining mutagenic specificity by analysis of tRNA suppressors. Mutagenesis.; 7: 41-6.
  • Takano K, Nakabeppu Y, Maki H, Horiuchi T, Sekiguchi M. (1986) Structure and function of dnaQ and mutD mutators of Escherichia coli. Mol Gen Genet.; 205: 9-13.
  • Tang M, Shen X, Frank EG, O'Donnell M, Woodgate R, Goodman MF. (1999) UmuD'2C is an error-prone DNA polymerase, Escherichia coli pol V. Proc Natl Acad Sci USA.; 96: 8919-24.
  • Vendewiele D, Borden A, O'Grady PI, Woodgate R, Lawrence CW. (1998) Efficient translesion replication in the absence of Escherichia coli Umu protein and 3'-5' exonuclease proofreading function. Proc Natl Acad Sci USA.; 95: 15519-24.
  • Vogel HJ, Bonner DM. (1956) Acetylo-ornithinase of Escherichia coli: Partial purification and some properties. J Biol Chem.; 218: 97-106.
  • Wagner J, Gruz P, Su-Ryang K, Umada M, Matsui K, Fuchs RPP, Nohmi T. (1999) The dinB gene encodes a novel E. coli DNA polymerase, DNA pol IV, involved in mutagenesis. Mol Cell.; 4: 281-6.
  • Wagner J, Etienne H, Janel-Blintz R, Fuchs RPP. (2002) Genetics of mutagenesis in E.coli: various combinations of translesion polymerases (Pol II, IV and V) deal with lesion/sequence context diversity. DNA Repair.; 1: 159-67.
  • Witkin EM. (1956) Time, temperature and protein synthesis: a study of ultraviolet-induced mutation in bacteria. Cold Spring Harbor Symp. Quant. Biol.; 21: 123-40.
  • Witkin EM. (1994) Mutation frequency decline revisited. BioEssays.; 16: 437-44.
  • Woodgate R. (1992) Construction of a umuDC operon substitution mutation in Escherichia coli. Mutat Res.; 281: 221-5.

Document Type

Publication order reference

Identifiers

YADDA identifier

bwmeta1.element.bwnjournal-article-abpv52i1p139kz
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