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Number of results

Journal

2008 | 57 | 1-2 | 109-118

Article title

Rola sekwencji (TTAGGG)n w badaniach kariotypu i ewolucji ptaków

Content

Title variants

EN
Role of the (TTAGGG)n sequence in studies on the karyotype and evolution of birds

Languages of publication

PL EN

Abstracts

EN
As in mammalian chromosomes, avian chromosomes consist of 5'-(TTAGGG)n-3'repeats, the sequence being the pattern conserved throughout vertebrate evolution. Although the avian genome is only 1/3 of the average mammalian genome, the telomeric sequences constitute as much as 4% of it and occur ten times more often than in mammals. What is particularly interesting from the point of view of bird karyotype evolution is research on the localization of telomeric sequences in the interstitial parts of chromosomal arms. Interstitial telomeric sequences occur on macro- and microchromosomes, and their distribution, especially of those located on macrochromosomes, varies a lot. Interstitial telomeric sequences act as hot recombination places and they are correlated with occurrence of chiasms. High frequency of telomeric sequences in bird microchromosomes also results in a particularly high rate of microchromosome recombination. Determination whether interstitial telomeric sequences on macrochromosomes are evolutionary places of microchromosomal fusions is a very significant issue in studies on bird telomeric sequences.

Keywords

Journal

Year

Volume

57

Issue

1-2

Pages

109-118

Physical description

Dates

published
2008

Contributors

  • Instytut Bioinżynierii i Hodowli Zwierząt, Akademia Podlaska, B. Prusa 14, 08-110 Siedlce, Polska
author
  • Instytut Bioinżynierii i Hodowli Zwierząt, Akademia Podlaska, B. Prusa 14, 08-110 Siedlce, Polska
  • Instytut Bioinżynierii i Hodowli Zwierząt, Akademia Podlaska, B. Prusa 14, 08-110 Siedlce, Polska
  • Instytut Bioinżynierii i Hodowli Zwierząt, Akademia Podlaska, B. Prusa 14, 08-110 Siedlce, Polska

References

  • Ansari H. A., Takagi N., Sasaki M., 1986. Interordinal conservatism of chromosomal banding patterns in Gallus domesticus (Galliformes) and Melopsittacus undulatus (Psittaciformes). Cytogenet. Cell Genet. 43, 6-9.
  • Ansari H. A., Takagi N., Sasaki M., 1988. Morphological differentiation of sex chromosomes in three species of ratite birds. Cytogenet. Cell Genet. 47, 185-188.
  • Bed'Hom B., Coullin P., Guillier-Gencik Z., Moulin S., Bernheim A., Volobouev V., 2003. Characterization of the atypical karyotype of the black-winged kite Elanus caeruleus (Falconiformes: Accipitridae) by means of classical and molecular cytogenetic techniques. Chromosome Res. 11, 335-343.
  • Bitgood J., Shoffner R. N., 1990.Cytology and cytogenetics. [W]: Poultry breeding and genetics. Crowford B. D. (red.), Elsevier Science Publishers, Amsterdam-Oxford-New York-Tokyo, 401-427.
  • Burt D. W., Bruley C., Dunn I. C., Jones C. T., Ramage A., Law A. S., Morrice D. R., Paton I. R., Smith J., Windsor D., Sazanov A., Fries R., Waddington D., 1999. The dynamics of chromosome evolution in birds and mammals. Nature 402, 411-413.
  • Christidis L., 1989. Kariotypic analyses in birds. [W:] Cytogenetics of animals Halman C. (red.), Cambrian Printers, UK, 125-132.
  • Christidis L., 1990. Aves. [W:] Animal cytogenetics 4: Chordata 3. John B. (red.). Gebrüder Bornträger, Berlin.
  • Delany M. E., Krupkin A. B., Miller M. M., 2000. Organization of telomere sequences in birds: evidence for arrays of extreme length and for in vivo shortening. Cytogenet. Cell Genet. 90, 139-145.
  • Donelly G. M., Newcomer E. H., 1963. Autoradiographic patterns in cultured leucocytes of the Domestic fowl. Exp. Cell Res. 30, 363-368.
  • Ellegren H., 2007. Molecular evolutionary genomics of birds. Cytogenet. Genome Res. 117, 120-30.
  • Fillon V., Morisson M., Zoorob R., Auffray C., Douaire M., Gellin J., Vignal A., 1998. Identyfication of sixteen chicken microchromosomes by molecular markers using two color fluorescent in situ hybridization (FISH). Chromosome Res. 6, 307-313.
  • Ford E. H. R., Wollam D. H. M., 1964. Testicular chromosomes of Gallus domesticus. Chromosoma (Berl.) 15, 568-578.
  • Galkina S., Lukina N., Zakharova K., Rodionov A. V., 2005. Interstitial (TTAGGG)n sequences are not hot spots of recombination in the chicken lampbrush macrochromosomes 1-3. Chromosome Res. 13, 551-557.
  • Garagna S., Broccoli D., Redi C. A., Searle J.B., Cooke H.J., Capanna E., 1995. Robertsonian metacentrics of the house mouse lose telomeric sequences but retain some minor satellite DNA in the pericentromeric area. Chromosoma 103, 685-692.
  • Griffin D. K., Robertson L. B., Tempest H. G., Skinner B. M., 2007. The evolution of the avian genome as revealed by comparative molecular cytogenetics. Cytogenet. Genome Res. 117, 64-77.
  • Guttenbach M., Nanda I., Feichtinger W., Masabanda J. S., Griffin D. K., Schmid M., 2003. Comparative chromosome painting of chicken autosomal paints 1-9 in nine different bird species. Cytogenet. Genome Res. 103, 173-184.
  • Haaf T., Matera A. G., Wienberg J., Ward D. C., 1995. Presence and abundance of CENP-B box sequences in great ape subsets of primate-specific -α-satellite DNA. J. Mol. Evol. 41, 487-491.
  • Horvath J. E., Schwartz S., Eichler E. E., 2000. The mosaic structure of human pericentromeric DNA: a strategy for characterizing complex regions of the human genome. Genome Res. 10, 839-852.
  • Hutchison N., 1987. Lampbrush chromosomes of the chicken Gallus domesticus. J. Cell Sci. 105, 1493-1500.
  • ICGSC, 2004. Sequence and Comparative Analysis of the Chicken Genome Provide Unique Perspectives on Vertebrate Evolution. Nature 432, 695-716.
  • Kaelbling M., Fechheimer N. S., 1983. Synaptonemal complexes and the chromosome complement of domestic fowl Gallus domesticus. Cytogenet. Cell Genet. 35, 87-92.
  • Kropotova E. V., Gaginskaya E. R., 1984. Lampbrush chromosomes from the Japanese quail oocytes. Tsitologiia 26, 1008-1015.
  • Ladjali-Mohammedi K., Botgood J. J., Tixier-Boichard M., Ponce de Leon F. A., 1999. International System for Standardized Avian Karyotypes (ISSAK): standardized banded karyotypes of the domestic fowl (Gallus domesticus). Cytogenet. Cell Genet. 86, 271-276.
  • Lee C., Wevrick R., Fisher R. B., Ferguson-Smith M. A., Lin C. C., 1997. Human centromeric DNAs. Hum. Genet. 100, 291-304.
  • Masabanda J. S., Burt D. W., O'brien P. C., Vignal A., Fillon V., Walsh P. S., Cox H., Tempest H. G., Smith J., Habermann F., Schmid M., Matsuda Y., Ferguson-Smith M. A., Crooijmans R. P., Groenen M. A., Griffin D. K., 2004. Molecular Cytogenetic Definition of the Chicken Genome: The First Complete Avian Karyotype. Genetics 166, 1367-1373.
  • Meyne J., Baker R. J., Hobart H. H., Hsu T. C., Ryder O. A., Ward O. G., Wiley J. E. Wurster-Hill D. H., Yates T. L., Moyzis R. K., 1990. Distribution of non-telomeric sites of the (TTAGGG)n telomeric sequences in vertebrate chromosomes. Chromosoma 99, 3-10.
  • Moyzis R. K., Buckingham J. M., Cram L. S., Dani M., Deaven L. L., Jones M. D., Meyne J., Ratliff R. L., Wu J. R., 1988. A Highly Conserved Repetitive DNA Sequence, (TTAGGG)n, Present at the Telomeres of Human Chromosomes. Proc. Natl. Acad. Sci. USA 85, 6622-6626.
  • Nanda I., Schmid M., 1994. Localization of the telomeric (TTAGGG)n sequence in chicken (Gallus domesticus) chromosomes. Cytogenet. Cell Genet. 65, 190-193
  • Nanda I., Schneider-Rasp S., Winking H., Schmid M., 1995. Loss of telomeric sites in the chromosomes of Mus musculus domesticus (Rodentia: Muridae) during Robertsonian rearrangements. Chromosome Res. 3, 399-409.
  • Nanda I., Schrama D., Feichtinger W., Haaf T., Schartl M., Schmid M., 2002. Distribution of telomeric (TTAGGG)n sequences in avian chromosomes. Chromosoma 4, 215-227.
  • Nanda I., Karl E., Volobouev V., Griffin D. K., Schartl M., Schmid M., 2006. Extensive gross genomic rearrangements between chicken and Old World vultures Falconiformes: Accipitridae). Cytogenet. Genome Res. 112, 286-295.
  • Newcomer E. H., 1957. The mitotic chromosomes of the domestic fowl. Hereditas 48, 227-234.
  • Ohno S., 1967. Sex chromosomes and sex linked genes, Springer, Berlin Heidelberg New York.
  • Partridge L., Barton N. H., 1993. Optimality, mutation and the evolution of ageing. Nature 362, 305-311.
  • Pigozzi M. I., 1997. Analisis citologico, ultraestructural y funcional del sistemacromosomico sexual en la clase Aves. FCEyN, Universidad de Buenos Aires, Argentina
  • Pluta A. F., Zakian V. A., 1989. Recombination occurs during telomere formation in yeast. Nature 337, 429-433.
  • Rahn M. I., Solari A. J., 1986. Recombination nodules in the oocytes of the chicken, Gallus domesticus. Cytogenet. Cell Genet. 43, 187-193.
  • Raudsepp T., Houck M. L., O'Brien P. C., Ferguson-Smith M. A., Ryder O. A., Chowdhary B. P., 2002. Cytogenetic analysis of California condor (Gymnogyps californianus) chromosomes: comparision with chicken (Gallus gallus) macrochromosomes. Cytogenet. Genome Res. 98, 54-60.
  • Rodionov A. V., 1996. Micro versus macro: a review of structure and functions of avian micro-and macrochromosomes. Rus. J. Genet. 32, 517-527.
  • Rodionov A. V., 1997. Evolution of avian chromosomes and linkage groups. Rus. J. Genet. 33, 605-617.
  • Rodionov A. V., Chechik M. S., 2002. Lampbrush chromosomes in the Japanese quail Coturnix coturnix japonica: cytological maps of macro chromosomes and meiotic crossover frequency in females. Genetika 38, 1246-1251.
  • Rodionov A. V., Galkina S. A., Lukina N. A., Solovei I., Saccone S., 2002. Crossing over in chicken oogenesis: cytological and chiasma-based genetic maps of the chicken lampbrush chromosome 1. J. Hered. 93, 125-129.
  • Rodionov A. V., Galkina S. A., Lukina N. A., 2005. Maps of the lampbrush macrochromosomes of the chicken and Japanise quail. [W:] Second Report on Chicken Genes and Chromosomes 2005. Cytogenet. Genome Res. 109, 415-479.
  • Scherthan H., 1990. Localization of the repetitive telomeric sequence (TTAGGG)n in two muntjac species and implications for their karyotypic evolution. Cytogenet. Cell Genet. 53, 115-117.
  • Schmid W., 1962. DNA replication patterns of the heterochromosomes in Gallus domesticus. Cytogenetic 1, 344-352.
  • Schmid M., Nanda I., Guttenbach M., Steinlein C., Hoehn M., Schartl M., Haaf T., Weigend S., Fries R., Buerstedde J. M., Wimmers K., Burt D. W., Smith J., A'Hara S., Law A., Griffin D. K., Bumstead N., Kaufman J., Thomson P. A., Burke T., Groenen M. A., Crooijmans R. P., Vignal A., Fillon V., Morisson M., Pitel F., Tixier-Boichard M., Ladjali-Mohammedi K., Hillel J., Maki-Tanila A., Cheng H. H., Delany M. E., Burnside J., Mizuno S., 2000. First report on chicken genes and chromosomes 2000. Cytogenet. Cell Genet. 90, 169-218.
  • Schubert I., Schriever-Schwemmer G., Werner T., Adler I. D., 1992. Telomeric signals in Robertsonian fusion and fission chromosomes: implications for the origin of pseudoaneuploidy. Cytogenet. Cell Genet. 59, 6-9.
  • Shetty S., Griffin D. K., Graves J. A., 1999. Comparative painting reveals strong chromosome homology over 80 million years of bird evolution. Chromosome Res. 7, 289-295.
  • Slijepcevic P., 1998. Telomeres and mechanisms of Robertsonian fusion. Chromosoma 107, 136-140.
  • Smith J., Bruley C. K., Paton I. R., Dunn I., Jones C. T., Windsor D., Morrice D. R., Law A. S., Masabanda J., Sazanov A., Waddington D., Fries R., Burt D. W., 2000. Differences in gene density on chicken macrochromosomes and microchromosomes. Anim. Genet. 31, 96-103.
  • Takagi N., Sasaki M., 1974. A phylogenetic study of bird karyotypes. Chromosoma 46, 91-120.
  • Taylor H. A., Delany M. E., 2000. Ontogeny of telomerase in chicken: impact of downregulation on pre- and postnatal telomere length in vivo. Dev. Growth Differ. 42, 613-621.
  • Van Dongen M. W. M., De Boer L. E. M., 1984. Chromosome studies of 8 species of parrots of the families Cacatuidae and Psittacidae (Aves:Psittaciformes). Genetica 65, 109-117.
  • van Tuinen M., Hedges S. B., 2001. Calibration of avian molecular clock. Mol. Biol. Evol. 18, 206-213.
  • Venkatesan R. N., Price C., 1998. Telomerase expression in chickens: constitutive activity in somatic tissues and down-regulation in culture. Proc. Natl. Acad. Sci. USA 95, 14763-14768.
  • Warburton P. E., Willard H. F., 1996. Evolution of centromeric alpha satellite DNA: molecular organization within and between human and primate chromosomes. [W:] Human genome evolution. Jackson M., Strachan T., Dover G. (red.), Bios Scientific Publishers, Oxford, UK, 121-145.
  • Zakian V. A., 1989. Structure and function of telomeres. Annu. Rev. Genet. 23, 579-604.

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