Full-text resources of PSJD and other databases are now available in the new Library of Science.
Visit https://bibliotekanauki.pl

PL EN


Preferences help
enabled [disable] Abstract
Number of results
2006 | 53 | 3 | 463-473

Article title

Methylotrophic extremophilic yeast Trichosporon sp.: a soil-derived isolate with potential applications in environmental biotechnology

Content

Title variants

Languages of publication

EN

Abstracts

EN
A yeast isolate revealing unique enzymatic activities and substrate-dependent polymorphism was obtained from autochthonous microflora of soil heavily polluted with oily slurries. By means of standard yeast identification procedures the strain was identified as Trichosporon cutaneum. Further molecular PCR product analyses of ribosomal DNA confirmed the identity of the isolate with the genus Trichosporon. As it grew on methanol as a sole carbon source, the strain appeared to be methylotrophic. Furthermore, it was also able to utilize formaldehyde. A multi-substrate growth potential was shown with several other carbon sources: glucose, glycerol, ethanol as well as petroleum derivatives and phenol. Optimum growth temperature was determined at 25°C, and strong inhibition of growth at 37°C together with the original soil habitat indicated lack of pathogenicity in warm-blooded animals and humans. The unusually high tolerance to xenobiotics such as diesel oil (>30 g/l), methanol (50 g/l), phenol (2 g/l) and formaldehyde (7.5 g/l) proved that the isolate was an extremophilic organism. With high-density cultures, formaldehyde was totally removed at initial concentrations up to 7.5 g/l within 24 h, which is the highest biodegradation capability ever reported. Partial biodegradation of methanol (13 g/l) and diesel fuel (20 g/l) was also observed. Enzymatic studies revealed atypical methylotrophic pathway reactions, lacking alcohol oxidase, as compared with the conventional methylotroph Hansenula polymorpha. However, the activities of glutathione-dependent formaldehyde dehydrogenase, formaldehyde reductase, formate dehydrogenase and unspecific aldehyde dehydrogenase(s) were present. An additional glutathione-dependent aldehyde dehydrogenase activity was also detected. Metabolic and biochemical characteristics of the isolated yeast open up new possibilities for environmental biotechnology. Some potential applications in soil bioremediation and wastewater decontamination are discussed.

Year

Volume

53

Issue

3

Pages

463-473

Physical description

Dates

published
2006
received
2006-06-06
revised
2006-08-31
accepted
2006-09-12
(unknown)
2006-10-01

Contributors

  • Biochemistry Department, University of Agriculture, Kraków, Poland
  • Biochemistry Department, University of Agriculture, Kraków, Poland
  • Biochemistry Department, University of Agriculture, Kraków, Poland
  • Department of Microbiology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland
  • Department of Mycology, Chair of Medical Microbiology, Collegium Medicum, Jagiellonian University, Kraków, Poland
  • Biochemistry Department, University of Agriculture, Kraków, Poland

References

  • Alexieva Z, Ivanova D, Godjevargova T, Atanasov B (2002) Degradation of some phenol derivatives by Trichosporon cutaneum R57. Process Biochem 37: 1215-1219.
  • Bardana EJ Jr, Montanaro A (1991) Formaldehyde: an analysis of its respiratory, cutaneous, and immunologic effects. Ann Allergy 66: 441-452.
  • Dzirba J, Gren I, Rudzinska M, Labuzek S (2006) Degradation of phenol by free and immobilized mixed cultures of Pseudomonas strains. Acta Biochim Polon 53: (Suppl) 179.
  • Eiroa M, Kennes C, Veiga MC (2004a) Formaldehyde biodegradation and its inhibitory effect on nitrification. J Chem Technol Biotechnol 79: 499-504.
  • Eiroa M, Kennes C, Veiga MC ( 2004b) Formaldehyde and urea removal in a denitrifying granular sludge blanket reactor. Water Res 38: 3495-3502.
  • Eiroa M, Kennes C, Veiga MC (2005a) Simultaneous nitrification and formaldehyde biodegradation in an activated sludge unit. Bioresour Technol 96: 1914-1918.
  • Eiroa M, Vilar A, Kennes C, Veiga MC (2005b) Formaldehyde biodegradation in the presence of methanol under denitrifying conditions. J Chem Technol Biotechnol 81: 312-317.
  • Fell JW, Boekhout T, Fonseca A, Scorzetti G, Statzell-Tallman A (2000) Biodiversity and systematics of basidiomycetous yeasts as determined by large-subunit rDNA D1/D2 domain sequence analysis. Int J Syst Evol Microbiol 50: 1351-1371.
  • Fujita SI, Senda Y, Nakaguchi S, Hashimoto T (2001) Multiplex PCR using internal transcribed spacer 1 and 2 regions for rapid detection and identification of yeast strains. J Clin Microbiol 39: 3617-3622.
  • Glancer-Soljan M, Soljan V, Dragicevic TL, Cacic L (2001) Aerobic degradation of formaldehyde in wastewater from the production of melamine resins. Food Technol Biotechnol 39: 197-202.
  • Gleeson MA, Sudbery PE (1988) The methylotrophic yeasts. Yeast 4: 1-15.
  • Godjevargova T, Ivanova D, Alexieva Z, Dimova N (2003) Biodegradation of toxic organic components from industrial phenol production waste waters by free and immobilized Trichosporon cutaneum R57. Process Biochem 38: 915-920.
  • Gonzalez-Gil G, Kleerebezem R, Lettinga G (2000) Formaldehyde toxicity in anaerobic systems. Water Sci Technol 42: 223-229.
  • Hamme van JD, Singh A, Ward OP (2003) Recent advances in petroleum microbiology. Microbiol Mol Biol Rev 67: 503-549.
  • Kaszycki P, Koloczek H (2000) Formaldehyde and methanol biodegradation with the methylotrophic yeast Hansenula polymorpha in a model wastewater system. Microbiol Res 154: 289-296.
  • Kaszycki P, Tyszka M, Malec P, Koloczek H (2001) Formaldehyde and methanol biodegradation with the methylotrophic yeast Hansenula polymorpha. An application to real wastewater treatment. Biodegradation 12: 169-177.
  • Kato N, Miyawaki N, Sakazawa C (1982) Oxidation of formaldehyde by resistant yeasts Debaryomyces vanriji and Trichosporon penicillatum. Agric Biol Chem 46: 655-661.
  • Koloczek H, Czechowska K, Petryszak P, Kaszycki P (2004) Biodegradation of oil derivatives with methylotrophic yeast isolates. Possible enzymatic links between the methylotrophic and hydrocarbon-degrading pathways. Bioremediation of soils contaminated with aromatic compounds: Effects of rhizosphere, bioavailability, gene regulation and stress adaptation. NATO Advanced Research Workshop, 1-3 July 2004, Tartu, Estonia.
  • Kurtzman CP (2000) Systematics and taxonomy of yeasts. In Dimorphism in Human Phatogenic and Aphatogenic Yeasts (Ernst JF, Schmidt A, eds) vol. 5, pp1-14, Contrib Microbiol, Basel, Karger.
  • Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
  • Lowry OH, Rosebrough NJ, Farr AL, Randall RJ (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193: 265-275.
  • MacGillivray AR, Shiaris MP (1993) Biotransformation of polycyclic aromatic hydrocarbons by yeasts isolated from coastal sediments. Appl Environ Microbiol 59: 1613-1618.
  • Maidan NN, Gonchar MV, Sibirny AA (1997) Oxidation of exogenous formaldehyde in methylotrophic and non-methylotrophic yeast cells. Biochemistry (Mosc) 62: 636-640.
  • Michalik J (1975) Methanol in the metabolism of microorganisms. Post Mikrobiol 14: 93-109 (in Polish).
  • Michalik J, Raczynska-Bojanowska K (1976) Oxidation of methanol by facultative and obligate methylotrophs. Acta Biochim Polon 23: 375-386.
  • Middelhoven WJ, Scorzetti G, Fell JW (2001) Trichosporon porosum comb. nov., an anamorphic basidiomycetous yeast inhabiting soil, related to the loubieri / laibachii group of species that assimilate hemicelluloses and phenolic compounds. FEMS Yeast Res 1: 15-22.
  • Middelhoven WJ, Scorzetti G, Fell JW (2004) Systematics of the anamorphic basidiomycetous yeasts genus Trichosporon Behrend with the description of five novel species: Trichosporon vadense, T. smithiae, T. dehoogii, T. scarabaeorum and T. gamsii. Int J Syst Evol Microbiol 54: 975-986.
  • Mirdamadi S, Rajabi A, Khalilzadeh P, Norozian D (2005) Isolation of bacteria able to metabolize high concentrations of formaldehyde. World J Microbiol Biotechnol 21: 1299-1301.
  • Nash T (1953) The colorimetric estimation of formaldehyde by means of the Hantzsch reaction. Biochemistry 55: 416-421.
  • Qu M, Bhattacharya SK (1997) Toxicity and biodegradation of formaldehyde in anaerobic methanogenic culture. Biotechnol Bioeng 55: 727-736.
  • Reiser J, Glumoff V, Ochsner UO, Fiechter A (1994) Molecular analysis of the Trichosporoncutaneum DSM 70698 argA gene and its use for DNA-mediated transformations. J Bacteriol 176: 3021-3032.
  • Sampaio JP (1999) Utilization of low molecular weight aromatic compounds by heterobasidiomycetous yeasts: taxonomic implications. Can J Microbiol 45: 491-512.
  • Santos VL, Linardi VR (2001) Phenol degradation by yeast isolated from industrial effluents. J Gen Appl Microbiol 47: 213-221.
  • Satyanarayana T, Raghukumar C, Shivaji S (2005) Extremophilic microbes: Diversity and perspectives. Curr Sci 89: 78-90.
  • Schwartz RA (2004) Superficial fungal infections. Lancet 364: 1173-1182.
  • Sibirny AA, Titorenko VI, Gonchar MV, Ubiyvovk VM, Ksheminskaya GP, Vitvitskaya OP (1988) Genetic control of methanol utilization in yeasts. J Basic Microbiol 28: 293-319.
  • Sietmann R, Hammer E, Schauer F (2002) Biotransformation of biarylic compounds by yeasts of the genus Trichosporon. Syst Appl Microbiol 25: 332-339.
  • Spencer JFT, Ragout de Spencer AL, Laluce C (2002) Non-conventional yeasts. Appl Microbiol Biotechnol 58: 147-156.
  • Sugita T, Nishikawa A, Shinoda T (1998) Identification of Trichosporon asahii by PCR based on sequences of the internal transcribed spacer regions. J Clin Microbiol 36: 2742-2744.
  • Sugita T, Nishikawa A, Ikeda R, Shinoda T (1999) Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for identification of Trichosporon identification. J Clin Microbiol 37: 1985-1993.
  • Sugita T, Takashima M, Nakase T, Ichikawa T, Ikeda R, Shinoda T (2001) Two new yeasts, Trichosporon debeurmannianum sp. nov. and Trichosporon dermatis sp. nov., transferred from Cryptococcus humicola complex. Int J Syst Evol Microbiol 51: 1221-1228.
  • Sugita T, Takashima M, Nakase T, Ichikawa T, Shinoda T, Nishikawa A (2002) A basidiomycetous anamorphic yeast, Trichosporon terricola sp. nov., isolated from soil. J Gen Appl Microbiol 48: 293-297.
  • Tsai SC, Tsai LD, Li YK (2005) An isolated Candida albicans TL3 capable of degrading phenol at large concentration. Biosci Biotechnol Biochem 69: 2358-2367.
  • Walker GM (1998) Yeast Physiology and Biotechnology. John Wiley & Sons, Chichester, New York.
  • Yang Z, Suzuki H, Sasaki S, Karube I (1996) Disposable sensor for biochemical oxygen demand. Appl Microbiol Biotechnol 46: 10-14.

Document Type

Publication order reference

Identifiers

YADDA identifier

bwmeta1.element.bwnjournal-article-abpv53p463kz
JavaScript is turned off in your web browser. Turn it on to take full advantage of this site, then refresh the page.