Full-text resources of PSJD and other databases are now available in the new Library of Science.
Visit https://bibliotekanauki.pl

PL EN


Preferences help
enabled [disable] Abstract
Number of results
2003 | 50 | 4 | 1064-1073

Article title

Expression level of Ubc9 protein in rat tissues.

Content

Title variants

Languages of publication

EN

Abstracts

EN
Ubc9 is a homologue of the E2 ubiquitin conjugating enzyme and participates in the covalent linking of SUMO-1 molecule to the target protein. In this report we describe a simple and efficient method for obtaining pure human recombinant Ubc9 protein. The purified Ubc9 retained its native structure and was fully active in an in vitro sumoylation assay with the promyelocytic leukaemia (PML) peptide as a substrate. In order to better understand the physiology of Ubc9 protein we examined its levels in several rat tissues. Immunoblot analyses performed on tissue extracts revealed quantitative and qualitative differences in the expression pattern of Ubc9. The Ubc9 protein was present at a high level in spleen and lung. Moderate level of Ubc9 was detected in kidney and liver. Low amount of Ubc9 was observed in brain, whereas the 18 kDa band of Ubc9 was barely visible or absent in heart and skeletal muscle. In heart and muscle extracts the Ubc9 antibodies recognized a 38 kDa protein band. This band was not visible in extracts of other rat tissues. A comparison of the relative levels of Ubc9 mRNA and protein indicated that the overall expression level of Ubc9 was the highest in spleen and lung. In spleen, lung, kidney, brain, liver and heart there was a good correlation between the 18 kDa protein and Ubc9 mRNA levels. In skeletal muscle the Ubc9 mRNA level was unproportionally high comparing to the level of the 18 kDa protein. The presented data indicate that in the rat the expression of the Ubc9 protein appears to have some degree of tissue specificity.

Year

Volume

50

Issue

4

Pages

1064-1073

Physical description

Dates

published
2003
received
2003-09-27
revised
2003-11-28
accepted
2003-12-09

Contributors

  • Department of Molecular Medicine, Medical University of Gdańsk, 80-211 Gdańsk, Poland
author
  • Department of Molecular Medicine, Medical University of Gdańsk, 80-211 Gdańsk, Poland
  • Department of Molecular Medicine, Medical University of Gdańsk, 80-211 Gdańsk, Poland
  • Department of Laboratory Medicine, Medical University of Gdańsk, 80-211 Gdańsk, Poland
  • Department of Molecular Medicine, Medical University of Gdańsk, 80-211 Gdańsk, Poland

References

  • Baier A, Meineckel I, Gay S, Pap T. (2003) Apoptosis in rheumatoid arthritis. Curr Opin Rheumatol.; 15: 274-9.
  • Bencsath KP, Podgorski MS, Pagala VR, Slaughter CA, Schulman BA. (2002) Identification of multifunctional binding site on Ubc9p required for Smpt3p conjugation. J Biol Chem.; 277: 47938-45.
  • Bradford MM. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem.; 72: 248-54.
  • Chakrabarti SR, Sood R, Ganguly S, Bohlander S, Shen Z, Nucifora G. (1999) Modulation of TEL transcription activity by interaction with the ubiquitin-conjugating enzyme UBC9. Proc Natl Acad Sci U S A.; 96: 7467-72.
  • Ciechanover A, Heller H, Elias S, Haas AL, Hershko A. (1980) ATP-dependent conjugation of reticulocyte proteins with the polypeptide required for protein degradation. Proc Natl Acad Sci U S A.; 77: 1365-8.
  • Desterro JM, Rodriguez MS, Hay RT. (1998) SUMO-1 modification of IκBα inhibits NF-κB activation. Mol Cell.; 2: 233-9.
  • Donghai L, Tatham MH, Yu B, Kim S, Hay RT, Chen Y. (2002) Identification of a substrate recognition site on Ubc9. J Biol Chem.; 277: 21740-8.
  • Golebiowski F, Kowara R, Pawelczyk T. (2001) Distribution of Fhit protein in rat tissues and its intracellular localization. Mol Cell Biochem.; 226: 49-55.
  • Hahn SL, Wasylyk B, Criqui-Filipe P, Criqui P. (1997) Modulation of ETS-1 transcriptional activity by huUBC9, a ubiquitin-conjugating enzyme. Oncogene.; 15: 1489-95.
  • Hakes DJ, Dixon JE. (1992) New vectors for high level expression of recombinant proteins in bacteria. Anal Biochem.; 202: 293-8.
  • Hofmann H, Floss S, Stamminger T. (2000) Covalent modification of the transactivator protein IE2-p86 of human cytomegalovirus by conjugation to the ubiquitin-homologous proteins SUMO-1 and hSMT3b. J Virol.; 74: 2510-24.
  • Kang SI, Chang WJ, Cho SG, Kim IY. (2003) Modification of promyelocytic leukemia zinc finger protein (PLZF) by SUMO-1 conjugation regulates its transcriptional repressor activity. J Biol Chem. (in press).
  • Kaul S, Blackford JA, Cho S, Simons SS Jr. (2002) Ubc9 is a novel modulator of the induction properties of glucocorticoid receptors. J Biol Chem.; 277: 12541-9.
  • Kowara R, Gryckiewicz E, Matecki A, Pawelczyk T. (1999) The ultraviolet studies on protein-lipid interaction of a protein kinase C-γ phorbol-binding domain. Acta Biochim Polon.; 46: 405-17.
  • Kurtzman AL, Schechter N. (2001) Ubc9 interacts with a nuclear localization signal and mediates nuclear localization of the paired-like homeobox protein Vsx-1 independent of SUMO-1 modification. Proc Natl Acad Sci U S A.; 98: 5602-7.
  • Laemmli UK. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature.; 227: 680-5.
  • Lowry OH, Rosebrough NJ, Farr AL, Randall RJ. (1951) Protein measurements with the Folin phenol reagent. J Biol Chem.; 193: 263-73.
  • Mahajan R, Delphin C, Guan T, Gerace L, Melchior F. (1997) A small ubiquitin-related polypeptide involved in targeting RanGAP1 to nuclear pore complex protein RanBP2. Cell.; 88: 97-107.
  • Mao Y, Sun M, Desai SD, Liu LF. (2000) SUMO-1 conjugation to topoisomerase I: a possible repair response to topoisomerase-mediated DNA damage. Proc Natl Acad Sci U S A.; 97: 4046-51.
  • Matunis MJ, Coutavas E, Blobel G. ((1996) A novel ubiquitin-like modification modulates the partitioning of the Ran-GTPase-activating protein RanGAP1 between the cytosol and the nuclear pore complex. J Cell Biol.; 135: 1457-70.
  • Müller S, Hoege C, Pyrowolakis G, Jentsch S. (2001) SUMO, ubiquitin's mysterious cousin. Nat Rev Mol Cell Biol.; 2: 202-10.
  • Poukka H, Aarnisalo P, Karvonen U, Palvimo JJ, Janne OA. (1999) Ubc9 interacts with the androgen receptor and activates receptor-dependent transcription. J Biol Chem.; 274: 19441-6.
  • Rodriguez MS, Desterro JM, Lain S, Midgley CA, Lane DP, Hay RT. (1999) SUMO-1 modification activates the transcriptional response of p53. EMBO J.; 18: 6455-61.
  • Sakowicz M, Grdeń M, Pawełczyk T. (2001) Expression level of adenosine kinase in rat tissues. Lack of phosphate effect on the enzyme activity. Acta Biochim Polon.; 48: 745-54.
  • Sambrook J, Fritsch EF, Maniatis F. (1989) In Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
  • Shi Y, Zou M, Farid NR, Paterson MC. (2000) Association of FHIT (fragile histidine triad), a candidate tumor suppressor gene, with the ubiquitin-conjugating enzyme hUBC9. Biochem J.; 352: 443-8.
  • Tatham MH, Kim S, Yu B, Jaffray E, Song J, Zheng J, Rodriguez MS, Hay RT, Chen Y. (2003) Role of an N-terminal site of Ubc9 in SUMO-1, -2, and -3 binding and conjugation. Biochemistry.; 42: 9959-69.
  • Wang ZY, Qiu QQ, Seufert W, Taguchi T, Testa JR, Whitmore SA, Callen DF, Welsh D, Shenk T, Deuel TF. (1996) Molecular cloning of the cDNA and chromosome localization of the gene for human ubiquitin-conjugating enzyme 9. J Biol Chem.; 271: 24811-6.

Document Type

Publication order reference

Identifiers

YADDA identifier

bwmeta1.element.bwnjournal-article-abpv50i4p1064kz
JavaScript is turned off in your web browser. Turn it on to take full advantage of this site, then refresh the page.