PL EN


Preferences help
enabled [disable] Abstract
Number of results
Journal
2013 | 11 | 12 | 2107-2119
Article title

High-throughput powder X-ray diffraction, IR-spectroscopy and ion chromatography analysis of urinary stones: A comparative study

Content
Title variants
Languages of publication
EN
Abstracts
EN
The instrumental qualitative analysis of urinary stones is a critical step in clinical practice and urological research. A powder X-ray diffraction, IR-spectroscopy and ion chromatography have been applied for the qualitative analysis of 20 urinary stones. Suggestions for a sample preparation and an optimal measurement strategy were formulated. The main difficulties for the powder X-ray diffraction qualitative analysis are a limiting amount of the sample and a preferential orientation of crystals, both issues should be minimized by the special sample preparation. Urinary stones samples have been clustered into four groups using different sets of numerical input data (cation and anion content, phase composition). At the same time a high-throughput multivariate clustering has been applied for powder X-ray diffraction and IR-spectroscopy data. The multivariate whole-profile approach can be used as a tool for a high-throughput time reducing technique for clinical practice, when a quick and stable classification of samples is required. All three sets of the data can be automatically separated into three clusters: oxalate-reach, oxalate-pure and non-oxalate samples. Uricite-pure and uricite-rich samples can be easily clustered. [...]
Publisher

Journal
Year
Volume
11
Issue
12
Pages
2107-2119
Physical description
Dates
published
1 - 12 - 2013
online
26 - 9 - 2013
Contributors
author
  • Department of Analytical and Organic Chemistry, Siberian Federal University, 660041, Krasnoyarsk, Russia, yusenkom@uni-muenster.de
  • Department of Chemistry, Center for Materials Science and Nanotechnology, University of Oslo, PO Box 1033, Blindern, N-0315, Oslo, Norway, kirill.yusenko@smn.uio.no
author
  • Department of Crystal Chemistry, Nikolaev Institute of Inorganic Chemistry, 630090, Novosibirsk, Russia
  • Department of Physical and Inorganic Chemistry, Siberian Federal University, 660041, Krasnoyarsk, Russia
  • Department of Urology, Andrology and Sexology, Vojno-Yasenetsky Krasnoyarsk Medical State University, 660022, Krasnoyarsk, Russia
  • Department of Analytical and Organic Chemistry, Siberian Federal University, 660041, Krasnoyarsk, Russia
author
  • Institute of Molecular Tumor Biology (IMTB), Medical Faculty of the University of Münster (Westfälische Wilhelms-Universität), D-48149, Münster, Germany
References
  • [1] V. Romero, H. Akpinar, D.G. Assimos, Reviews in Urology 12(2–3), 86 (2010)
  • [2] A.L. Rodgers, Urolithialisis 41(2), 99 (2013) http://dx.doi.org/10.1007/s00240-012-0516-9[Crossref]
  • [3] A. Trinchieri, Clin. Cases Miner Bone Metab. 5(2), 101 (2008)
  • [4] M. Daudon, P. Jungers, D. Bazin, NEJM. 359(1), 100 (2008) http://dx.doi.org/10.1056/NEJMc0800990[Crossref]
  • [5] M. Daudon, C.A. Bader, P. Jungers, Scann. Microsc. 7(3), 1081 (1993)
  • [6] M. Daudon, D. Bazin, G. André, P. Jungers, A. Cousson, P. Chevallier, E. Véron, G. Matzen. J. Appl Cryst. 42, 109 (2009) http://dx.doi.org/10.1107/S0021889808041277[Crossref]
  • [7] S. Gracia-Garcia, F. Millan-Rodriguez, F. Rousaud-Baron, R. Montanes-Bermudes, O. Angerri-Feu, F. Sanchez-Martin, H. Villavicencio- Mavrich, A. Oliver-Samper. Actas Urol. Esp. 35(6), 354 (2011) http://dx.doi.org/10.1016/j.acuro.2011.01.017[Crossref]
  • [8] M.L. Giannossi, V. Summa, In: C. Aydinalp (Ed.), An Introduction to the Study of Mineralogy (InTech, Croatia, 2012), ISBN:978-953-307-896-0
  • [9] F. Grases, A. Costa-Bauza, M. Ramis, V. Montesinos, A. Conte, Clin. Chim. Acta. 322, 29 (2002) http://dx.doi.org/10.1016/S0009-8981(02)00063-3[Crossref]
  • [10] M. Daudon, D. Bazin. J. Phys: Conf Ser. 425, 022006 (2013) http://dx.doi.org/10.1088/1742-6596/425/2/022006[Crossref]
  • [11] D. Bazin, M. Daudon, P. Chevallier, S. Rouziere, E. Elkaim, D. Thiaudière, B. Fayard, E. Foy, P.A. Albouy, G. André, G. Matzen, E. Véron, Ann. Biol. Clin. 64(2), 125 (2006)
  • [12] J. Talati, F. Abbas, Urolithiasis Basic Science and Clinical Practice (Springer, London, 2012)
  • [13] D. Bazin, P. Chevallier, G. Matzen, P. Jungers, M. Daudon, Urol Res. 35(4), 179 (2007) http://dx.doi.org/10.1007/s00240-007-0099-z[Crossref]
  • [14] F. Grases, L. Garcia-Ferragut, A. Costa-Bauza, Recent Res. Dev. Pure Appl. Anal. Chem. 1, 187 (1998)
  • [15] Z. Wang, J. Xia, F. Zhao, Q. Han, X. Guo, H. Wang, M. Ding, Chin. Chem. Lett. 24(3), 243 (2013) http://dx.doi.org/10.1016/j.cclet.2013.01.048[Crossref]
  • [16] Y. Zhang, P. Thepsithar, X. Jiang, J. Tay, Industrial Crops and Products 44, 459 (2013) http://dx.doi.org/10.1016/j.indcrop.2012.10.010[Crossref]
  • [17] Z. Wang, H. Cui, J. Xia, Q. Han, N. Lv, J. Gao, X. Guo, F. Zhang, J. Ma, G. Su, Food Analytical Methods 24, 1 (2013)
  • [18] Q. Xu, C. Xu, Z. Wang, Y.R. Wang, L.T. Jin, H. Haraguchi, A. Itoh, K. Tanaka, Chromatographia 53, 81 (2001) http://dx.doi.org/10.1007/BF02492432[Crossref]
  • [19] T.A. Maryutina, N.S. Musina, J. Anal. Chem. 67(10), 862 (2012) http://dx.doi.org/10.1134/S106193481210005X[Crossref]
  • [20] I.V. Nerobeeva, T.N. Ermolaeva, Inorg. Mat. 45(14), 1580 (2009) http://dx.doi.org/10.1134/S002016850914012X[Crossref]
  • [21] R.M. Barnes, Biological trace element research 6, 93 (1984) http://dx.doi.org/10.1007/BF02918324[Crossref]
  • [22] G.P. Kasidas, C.T. Samuell, T.B. Weir, Ann. Clin. Biochem. 41, 91 (2004) http://dx.doi.org/10.1258/000456304322879962[Crossref]
  • [23] U. Al-Atar, A.A. Bokov, D. Marshall, J.M. Teichman, B.D. Gates, Z.G. Ye, N.R. Branda, Chem. Mater. 22, 1318 (2010) http://dx.doi.org/10.1021/cm901751g[Crossref]
  • [24] A.V. Alekseev, S.A. Gromilov, J. Struct. Chem. 51(1), 156 (2010) http://dx.doi.org/10.1007/s10947-010-0022-2[Crossref]
  • [25] X. Carpentier, M. Daudon, O. Traxer, P. Janugers, A. Mazouyes, G. Matzen, E. Véron, D. Bazin, J. Urol. 73(5), (2009)
  • [26] R.E. Abdel-Hamil, R.E. Abdel-Aal, Comput. Methods and Programs in Biomedicine 58, 69 (1999) http://dx.doi.org/10.1016/S0169-2607(98)00075-3[Crossref]
  • [27] C.J. Gilmore, G. Barr, J. Paisley, J. Appl. Cryst. 37, 231(2004) http://dx.doi.org/10.1107/S002188980400038X[Crossref]
  • [28] G. Barr, W. Dong, C. J. Gilmore, J. Faber, J. Appl. Cryst. 37, 635 (2004) http://dx.doi.org/10.1107/S0021889804013743[Crossref]
  • [29] G. Barr, W. Dong, C.J. Gilmore, J. Appl. Cryst. 37, 243 (2004) http://dx.doi.org/10.1107/S0021889804000391[Crossref]
  • [30] E.G. Garzon, A. Ruiz-Conde, P.J. Sanchez-Soto, Am. J. Anal. Chem. 3, 347 (2012) http://dx.doi.org/10.4236/ajac.2012.35047[Crossref]
  • [31] D. Deborah Lau, D.G. Hay, M.R. Hill, B.W. Muir, S.A. Furman, D.F. Kennedy, Combinatorial Chemistry and High Throughput Screening 14, 28 (2011) http://dx.doi.org/10.2174/1386207311107010028[Crossref]
  • [32] W.I. Lisojvan, S.A. Gromilov, Precision in diffraction of polycrystals (Nauka, Novosibirsk, 1989) (in Russian)
  • [33] R. Selvaraju, G. Thiruppathi, A. Raja, Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 93, 260 (2012) http://dx.doi.org/10.1016/j.saa.2012.03.028[Crossref]
  • [34] E.V. Wilson, M.J. Bushiri, V.K. Vaidyan, Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy. 77(2), 442 (2010) http://dx.doi.org/10.1016/j.saa.2010.06.014[Crossref]
  • [35] E.V. Yusenko, O. P. Kalyakina, E.A. Polyntseva, S. N. Kalyakin, Polish Journal of Food and Nutrition Science 61Suppl. 1, 52 (2011)
  • [36] W. Kraus, G. Nolze. J. Appl. Cryst. 29, 301 (1996) http://dx.doi.org/10.1107/S0021889895014920[Crossref]
  • [37] W.I.F. David, K. Shankland, L.M. McCusker, Ch. Baerlocher (Eds.), Structure determination from powder diffraction data, International Union of Crystallography Monographs on Crystallography No. 13. (IUCr/Oxford University Press, Oxford, 2002)
  • [38] V. Pecharsky, P. Zavalij, Fundamentals of Powder Diffraction and Structural Characterization of Materials, 2nd edition (Springer Science, NY, 2009)
  • [39] K.H. Bichler, E. Eipper, K. Naber, V. Braun, R. Zimmermann, S. Lahme, Int. J. Antimicrobial Agents 19, 488 (2002) http://dx.doi.org/10.1016/S0924-8579(02)00088-2[Crossref]
  • [40] G.J. McLachlan, Stat. Methods Med. Research 1(1), 27 (1992) http://dx.doi.org/10.1177/096228029200100103[Crossref]
  • [41] L. Dijkshoorn, K.J. Towner, M. Struelens, New Approaches for the Generation and Analysis of Microbial Typing Data (Elesevier, Amsterdam, 2001)
  • [42] L. Kaufman, P.J. Rousseeuw, Finding Groups in Data: An Introduction to Cluster Analysis (Wiley, New York, 1990) http://dx.doi.org/10.1002/9780470316801[Crossref]
  • [43] C.J. Farrington, M.L. Liddy, A.C. Chalmers. Am. J. Clin. Pathol. 73, 96 (1980)
  • [44] B. Otnes, J. Urol. Nephrol. 7, 1 (1983)
  • [45] R.E. Abdel-Halim, A. Al-Sibaai, A.O. Baghlaf, J. Urol. Nephrol. 27(3), 337 (1993) http://dx.doi.org/10.3109/00365599309180444[Crossref]
Document Type
Publication order reference
Identifiers
YADDA identifier
bwmeta1.element.-psjd-doi-10_2478_s11532-013-0335-z
JavaScript is turned off in your web browser. Turn it on to take full advantage of this site, then refresh the page.